Pure Poetry: Roses are red Violets are blue We love Avena And the sheep do, too. (version 1) Roses are red Grasses are green We love Avena And the sheep are mean (version 2) -the Firestone lab techs and grad students Research Interests: · Biophysical interactions of bacteria with the soil environment. · The microbial community ecology of the processes important to ecosystem Nand C cycling. · Mechanisms of plant-microbial interaction (outside of the relatively well-defined symbioses). Current Projects: · Biophysical ecology of microbial degradation of pollutants. · Microbial processing of plant carbon to yield humic substances. · Plant-microbial C and N interactions in the rhizosphere. Click here for a list of selected publications.
	Family Photos:	Pool Party	Puerto Rico 2002
	Blodgett 2006			Puerto Rico 2006
People	Telephone				email
Romain Barnard	510-642-6847				rbarnard@berkeley.edu
Steve Blazewicz	510-642-6847				blazewicz@berkeley.edu
Damon Bradbury	510-643-2402				bradbury@berkeley.edu
Rebecca Daly	510-642-6847				rdaly@berkeley.edu
Laura Dane	510-642-2402				lauradane@berkeley.edu
Katerina Estera	510-642-6847				rinaest@gmail.com
Dara Goodheart	510-642-6847				goodheartd@berkeley.edu
Mary Firestone	510-642-3677				mkfstone@berkeley.edu
Don Herman	510-642-6847				djherman@.berkeley.edu
Erin Nuccio	510-642-6847				enuccio@berkeley.edu
Shengjing Shi	510-642-6847				shengjing.shi@berkeley.edu
Tsu-Ling Wang	510-642-6847				tling_julie@berkeley.edu
The research interests of our soil microbial ecology group include: · Biophysical interactions of bacteria with the soil environment.  We want to understand how the physical characteristics of the solid matrix determine growth and activity of soil microbes and how indigenous microbes alter the characteristics of their microhabitats in soil.  In the past several years we have focused on soil water relations, biofilms, and physical transport processes controlling the supply of substrates and nutrients to microbes. · The microbial community ecology of the processes important to ecosystem N and C cycling.  We want to know whether the structure of soil microbial communities control N or C transformations such as nitrification, denitrification, mineralization of organic compounds, and production / consumption of atmoshperically reactive trace gases.  How does microbial community structure vary among soils and how do differences in microbial community structure translate into differences in soil processes? · Mechanisms of plant-microbial interaction (outside of the relatively well-defined symbioses).  The interactions of plant roots with soil microorganisms are spatially and temporally complex; however, it is becoming increasingly apparent that these interactions are fundamental to soil carbon dynamics and the availability of inorganic and organic N to plants. Current research projects conducted by our group include: · Biophysical ecology of microbial degradation of pollutants.  We are currently investigating the mechanisms through which soil desiccation controls bacterial utilization of organic carbon compounds.  The water characteristics of soil control the availability of gas-phase constituents to bacteria as well as directly impacting the physiology of the organisms.  We are looking at the diffusional availability of a variety of organic compounds to bacteria encased in exopolysaccharide habitats.  The physical effects on substrate availability and the effects on cellular physiology combine to produce a range of water potential in soil optimized for bacterial degradation of pollutant compounds.  this type of information may be of value in managing soil systems to promote biodegradation of pollutant compounds. · Microbial processing of plant carbon to yield humic substances. The metabolic characteristics of the microbial community and the cellular composition (wall components, extracellular components) may have the potential to determine the rate and dominance of different carbon stabilization pathways.  In this research we ask whether soil microbial communities vary in their carbon processing characteristics.  We are assessing microbial functional and taxonomic diversity, investigating community control over carbon partitioning, and quantifying the contribution of microbial cell walls to stable carbon.  This work incorporates aspects of humus chemistry, soil microbilogy and ecosystem ecology to address the role that microorganisms and microbial diversity play in ecosystem functioning.  Ultimately, this work may have implications for regional carbon cycling models, and for predicting response of soil carbon pools to environmental and land-use change. Plant-microbial C and N interactions in the rhizosphere.  We are determining the processes and spatial and temporal patterning by which roots alter mineralization of C and N in the rhizosphere.  We are also attempting to understand the mechanisms involved in mineralization of the N from microbial biomass and whether the root zone is an active area of N mineralization and hence an important source of N for soil microbes and plant roots.  these questions about plant-microbial interactions are fundamental to C- and N-cycling and potentially determine ecosystem response to the changing environment.
Emeriti				can be reached at:
Teri Balser				teribalser@yahoo.com
Jeff Bird				Jbird@qc.cuny.edu
Eoin Brodie				ELBrodie@lbl.gov
Kristen DeAngelis				KDeAngelis@lbl.gov
Eric Dubinsky				EADubinsky@lbl.gov
Claire Eustace				claire_eustace2004@yahoo.com
Val Eviner				EvinerV@ecostudies.org
Charles H. Jaeger III				jaeger@arches.uga.edu
Christine Hawkes				chawkes@mail.utexas.edu
Trish Holden				holden@eos.crseo.ucsb.edu
Jason Jaeger				jaeger@arches.uga.edu
Kristine Johnson				kristinekjohnson@hotmail.com
Evaly Long				evaly.long@gmail.com
Ryan Miya				ryanmiya@hotmail.com
Catherine Osborne
Jennifer Pett-Ridge				pettridge2@llnl.gov
Sarah Placella				placella@msu.edu
Egbert Schwartz				Egbert.schwartz@nau.edu
Tia Shimada				tiaakemi@gmail.com
Pam Templer				ptempler@bu.edu
Andy Thompson				awt@nature.berkeley.edu
Mark Waldrop				mwaldrop@usgs.gov
Our mailing address is:				Our shipping address is:
ESPM - Ecosystem Sciences				ESPM – Ecosystem Sciences
137 Mulford Hall				54 Mulford Hall
University of California				University of California
Berkeley, CA  94720-3114				Berkeley, CA 94720
Last updated: September 7, 2011